HappyDoc Generated Documentation .\NeedlemanWunsch

. / NeedlemanWunsch 

Functions   
  matches2gappedSeqs 
matches2gappedSeqs (
        matches,
        s1,
        s2,
        gapChar=".",
        reverseSorts=True,
        )
  cloneSeq 
cloneSeq ( seq )
  nw 
nw (
        s1,
        s2,
        scoreMatch=10,
        scoreMismatch=-3,
        scoreGap=0,
        scoreGapOpen=-40,
        gapChar=".",
        returnSeqs=False,
        scoreMatrix=None,
        similarityMatrix=None,
        endsAreGaps=False,
        ssMatrix=None,
        ssFraction=0.9,
        gapOpenHelix=None,
        gapOpenStrand=None,
        gapOpenOther=None,
        debug=False,
        )
Classes   

This document was automatically generated Thu Feb 02 15:18:09 2006 by HappyDoc version 3.0.a1